Shine-Dalgarno sequence

RBS rbs

Feature Information

Note
full consensus sequence for ribosome-binding sites upstream of start codons in E. coli; complementary to a region in the 3' end of the 16S rRNA (Chen et al., 1994)
Type
RBS
Category
rbs

Found in 356 Plasmids (showing 301–350)

Plasmid Species Position Strand
pSEVA12DKR-A 58304 Synthetic 694..703 Fwd
pSEVA12DKR-A 58304 Synthetic 742..751 Fwd
pSEVA12DKR-E 58305 Synthetic 692..701 Fwd
pSEVA12DKR-E 58305 Synthetic 740..749 Fwd
pSEVA12DKR-J 58306 Synthetic 699..708 Fwd
pSEVA12DKR-J 58306 Synthetic 747..756 Fwd
pSEVA12TEC-B 58307 Synthetic 714..723 Fwd
pSEVA12TEC-B 58307 Synthetic 763..772 Fwd
pSEVA12TEC-I 58308 Synthetic 2482..2491 Fwd
pSEVA12TEC-I 58308 Synthetic 2530..2539 Fwd
pET14b_tev_PSG 59731 Homo sapiens 655..664 Fwd
pET14b_SG 59737 Homo sapiens 345..354 Fwd
pRS424-TUB2 (1-428) 60395 Saccharomyces cerevisiae 725..734 Fwd
pRS424-TUB2 - human TUBB2a Cterminal tail 60396 Saccharomyces cerevisiae 660..669 Fwd
pRS424-TUB2 - human TUBB2a Cterminal tail C1… 60398 Synthetic 659..668 Fwd
pRS424-TUB2 - human TUBB7 Cterminal tail 60399 Synthetic 638..647 Fwd
pRS424-TUB2 - human TUBB4a Cterminal tail 60402 Synthetic 658..667 Fwd
pRS424-TUB2 - human TUBB6 Cterminal tail 60403 Saccharomyces cerevisiae 662..671 Fwd
pRS424-TUB2 - human TUBB3 Cterminal tail del… 60404 Synthetic 684..693 Fwd
pRS424-TUB2 - human TUBB4a Cterminal tail C1… 60405 Synthetic 665..674 Fwd
pCS2-nCas9n-nanos 3’UTR 62542 Danio rerio 4156..4165 Fwd
pME-Cas9 63154 Danio rerio 4040..4049 Fwd
pME-Cas9-T2A-GFP 63155 Danio rerio 4814..4823 Fwd
pTd-4-15-13-1 63826 Synthetic 159..168 Fwd
pTd-4-15-13-2 63827 Synthetic 214..223 Fwd
pTd-4-15-13-3 63828 Synthetic 214..223 Fwd
pTd-4-15-13-4 63829 Synthetic 214..223 Fwd
pTd-4-15-13-5 63830 Synthetic 214..223 Fwd
pTd-4-15-13-6 63831 Synthetic 214..223 Fwd
pTd-4-15-13-7 63832 Synthetic 214..223 Fwd
pTd-4-15-13-8 63833 Synthetic 245..254 Fwd
pTd-4-15-13-9 63834 Synthetic 247..256 Fwd
pTd-4-15-13-10 63835 Synthetic 247..256 Fwd
pTd-4-15-13-11 63836 Synthetic 245..254 Fwd
pSIJ8 68122 Escherichia coli 2106..2115 Fwd
pJK694 72379 Homo sapiens 583..592 Fwd
pORTMAGE-2 72677 Escherichia coli 1649..1658 Fwd
pORTMAGE-3 72678 Escherichia coli 6404..6413 Fwd
pORTMAGE-4 72679 Escherichia coli 6352..6361 Fwd
pEcCas 73227 Synthetic 7570..7579 Fwd
pGex-4T-2_LC3A 73946 Homo sapiens 55..64 Fwd
pUAS:Cas9T2AGFP;U6:sgRNA1;U6:sgRNA2 74009 Danio rerio 5366..5375 Fwd
pGEX-SIRPT1-Pelodiscus sinensis 75322 Synthetic 493..502 Fwd
pColdII-SIRPT1-Pelodiscus sinensis 75354 Synthetic 491..500 Fwd
STK3_HUMAN_D0 79689 Homo sapiens 383..392 Fwd
DMPK_HUMAN_D0 79717 Homo sapiens 309..318 Fwd
pMTB2-Avi-Cerulean-Rpl10a 79880 Danio rerio 898..907 Fwd
pMT-ubb-Avi-Cerulean-Rpl10a 79882 Danio rerio 650..659 Fwd
pCali2 86119 Synthetic 5640..5649 Fwd
pThermeleon 86120 Synthetic 5126..5135 Fwd

DNA Sequence Variants

Sequence context may differ across plasmids due to position and neighboring features.

DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT