Shine-Dalgarno sequence

RBS rbs

Feature Information

Note
full consensus sequence for ribosome-binding sites upstream of start codons in E. coli; complementary to a region in the 3' end of the 16S rRNA (Chen et al., 1994)
Type
RBS
Category
rbs

Found in 356 Plasmids (showing 201–250)

Plasmid Species Position Strand
pAGD335 219499 Synthetic 3448..3457 Fwd
pMRS-dCas9 220193 Synthetic 153..162 Fwd
pMRS-LacI-dCas9 220194 Synthetic 1740..1749 Fwd
pMRS-AraC-dCas9 220195 Synthetic 1318..1327 Fwd
pMRS-XylS-dCas9 220196 Synthetic 2111..2120 Fwd
pMRS-GFP 220197 Synthetic 153..162 Fwd
pMRS-LacI-GFP 220198 Synthetic 1740..1749 Fwd
pMRS-AraC-GFP 220199 Synthetic 1318..1327 Fwd
pMRS-XylS-GFP 220200 Synthetic 2111..2120 Fwd
pMRS-BG35-GFP 220201 Synthetic 165..174 Fwd
pMRS-BG42-GFP 220202 Synthetic 165..174 Fwd
pBB328 221533 Synthetic 723..732 Fwd
pBB328 221533 Synthetic 1997..2006 Fwd
pBB328 221533 Synthetic 5017..5026 Fwd
pBB328 221533 Synthetic 6330..6339 Fwd
pGEX-4T1_GST-LC3A 223726 Homo sapiens 989..998 Fwd
p128Tol2-Olactb:Cas9-t2A-GFP, 4xU6:sgRNA 226834 Danio rerio 8830..8839 Fwd
CPH3949_HIS-MBP-TEV-Tom1p-HECT-2850-3268 227089 Saccharomyces cerevisiae 5380..5389 Fwd
pCIFR-2 227663 Synthetic 199..208 Fwd
pCIFR-4 227664 Synthetic 199..208 Fwd
pCIFR-6 227665 Synthetic 1225..1234 Fwd
pCIFR-8 227666 Synthetic 167..176 Fwd
p104Tol2-tp1:Cas9-t2A-GFP, 4xU6:sgRNA 227773 Danio rerio 2393..2402 Fwd
p155ME-loxP-dsR-loxP-Cas9-t2A-GFP 227774 Danio rerio 572..581 Fwd
pJEx411c_pelB-NbD6-Strep2 228897 Synthetic 4449..4458 Fwd
pJEx411c_pelB-N32-Strep2 228898 Synthetic 4449..4458 Fwd
pCWU50 232318 Synthetic 3722..3731 Fwd
pZP06 232320 Synthetic 3025..3034 Fwd
pTW334e 237315 Arabidopsis thaliana 5795..5804 Fwd
pTW334f2 237316 Arabidopsis thaliana 5833..5842 Fwd
pTW334g 237317 Arabidopsis thaliana 5798..5807 Fwd
pTW334h 237318 Arabidopsis thaliana 5810..5819 Fwd
pTW334i 237319 Arabidopsis thaliana 5807..5816 Fwd
pBAD42-BtuCEDFB 237541 Escherichia coli 7789..7798 Fwd
pBAD42-BtuCEDFB 237541 Escherichia coli 8832..8841 Fwd
pTol2-cmlc2-nGFP-nCas9 238308 Danio rerio 6807..6816 Fwd
eOYW014 238394 Synthetic 4227..4236 Fwd
eOYW019 238399 Synthetic 4302..4311 Fwd
pDonr 201_MGA 240327 Homo sapiens 9571..9580 Fwd
pREC1010-Eco1 240680 Synthetic 8113..8122 Fwd
pREC1010-Eco2 240681 Synthetic 104..113 Fwd
pREC1010-Ban1 240682 Synthetic 1376..1385 Fwd
pREC1010-Abe1 240683 Synthetic 8015..8024 Fwd
pREC1010-Eas1 240685 Synthetic 125..134 Fwd
pREC1010-Csp1 240686 Synthetic 1250..1259 Fwd
pREC1010-Tsp1 240687 Synthetic 9075..9084 Fwd
pREC1010-Ebu1 240688 Synthetic 126..135 Fwd
pREC1010-Hcl1 240689 Synthetic 4825..4834 Fwd
pREC1010C-Eco1 240690 Synthetic 4553..4562 Fwd
pREC1010lac-Eco1 240691 Synthetic 466..475 Fwd

DNA Sequence Variants

Sequence context may differ across plasmids due to position and neighboring features.

DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
TAAGGAGGT