Shine-Dalgarno sequence

RBS rbs

Feature Information

Note
full consensus sequence for ribosome-binding sites upstream of start codons in E. coli; complementary to a region in the 3' end of the 16S rRNA (Chen et al., 1994)
Type
RBS
Category
rbs

Found in 356 Plasmids (showing 151–200)

Plasmid Species Position Strand
pET-28a(+)-His(6)-AtPCO1(wt) 191798 Arabidopsis thaliana 1013..1022 Fwd
pET-28a(+)-His(6)-AtPCO3(wt) 191800 Arabidopsis thaliana 2190..2199 Fwd
12.4kbVillin-ΔATG 19358 Mus musculus 5098..5107 Fwd
pDA313 195214 Synthetic 285..294 Fwd
pTcI39-switch 195557 Synthetic 3185..3194 Fwd
pDONR221-Ctdnep1_Cter 196522 Homo sapiens 2954..2963 Fwd
zCREST3:Cas9green; T2_gRNA 197647 Danio rerio 6803..6812 Fwd
pBBR1_DVK_AE(J23100-BCD2-E0040m-B0015) 197660 Synthetic 113..122 Fwd
pBBR1_DVK_AE(J23100-RiboJ-BCD2-E0040m-B0015) 197661 Synthetic 188..197 Fwd
pBBR1_DVK_AE(J23103-BCD2-E0040m-B0015) 197666 Synthetic 113..122 Fwd
pBBR1_DVK_AE(J23103-RiboJ-BCD2-E0040m-B0015) 197667 Synthetic 188..197 Fwd
pBBR1_DVK_AE(J23106-BCD2-E0040m-B0015) 197672 Synthetic 113..122 Fwd
pBBR1_DVK_AE(J23106-RiboJ-BCD2-E0040m-B0015) 197673 Synthetic 188..197 Fwd
pPRC6-ProC 198430 Synthetic 1383..1392 Fwd
pPRC6-ProD 198431 Synthetic 1383..1392 Fwd
zCREST3:Cas9green; T1_gRNA 199332 Danio rerio 6803..6812 Fwd
zCREST3:Cas9green; EGF_gRNA 199333 Danio rerio 6803..6812 Fwd
zCREST3:redCas9; control_gRNA 199334 Danio rerio 5957..5966 Fwd
zCREST3:Cas9green; T3_gRNA 199335 Danio rerio 6803..6812 Fwd
pTol2_claudink:Cas9green; control_gRNA 199336 Danio rerio 6817..6826 Fwd
pTol2_NBT:Cas9green; erbb2_gRNA171 199337 Danio rerio 6803..6812 Fwd
pTol2_LSEC:Cas9green; erbb2_gRNA171 199338 Danio rerio 6803..6812 Fwd
pTol2_claudink:Cas9green; erbb2_gRNA171 199339 Danio rerio 6803..6812 Fwd
pMA-Thermal_CTLA-4 199751 Mus musculus 4854..4863 Fwd
pMA-Thermal_CTLA-4 199751 Mus musculus 6545..6554 Fwd
pSELIS-RamR 202631 Synthetic 3725..3734 Fwd
pWR9 202645 Synthetic 4002..4011 Fwd
pWR10 202710 Synthetic 3348..3357 Fwd
pWR16 202711 Synthetic 4002..4011 Fwd
pWR23 202770 Synthetic 3783..3792 Fwd
pWR24 202771 Synthetic 3549..3558 Fwd
pWR58 202795 Synthetic 1720..1729 Fwd
pWR58 202795 Synthetic 3827..3836 Fwd
pWR54 203330 Synthetic 4146..4155 Fwd
pWR88 203422 Synthetic 4397..4406 Fwd
pWR95 203916 Synthetic 4422..4431 Fwd
pBP-R_dummy-RBS 204081 Synthetic 1200..1209 Fwd
pBP-R_MCD2 204090 Synthetic 1249..1258 Fwd
pBP-TagR_MCD2 204098 Synthetic 1207..1216 Fwd
pHIS3p:yomRuby3-Tub1+3'UTR::LEU2 204288 Saccharomyces cerevisiae 7029..7038 Fwd
pLRD07 208260 Saccharomyces cerevisiae 3780..3789 Fwd
pLRD16 208268 Saccharomyces cerevisiae 4344..4353 Fwd
pLRD20 208271 Saccharomyces cerevisiae 4551..4560 Fwd
pDonor_RB-TnV2_pJEx 213908 Synthetic 2226..2235 Fwd
pMP11 215559 Synthetic 9827..9836 Fwd
pD441-H6-SUMO-HyPerFLEX 216676 Synthetic 1647..1656 Fwd
pJQR3 218289 Synthetic 4147..4156 Fwd
pAGD248 219498 Synthetic 1226..1235 Fwd
pAGD248 219498 Synthetic 2522..2531 Fwd
pAGD335 219499 Synthetic 1226..1235 Fwd

DNA Sequence Variants

Sequence context may differ across plasmids due to position and neighboring features.

DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT