Shine-Dalgarno sequence

RBS rbs

Feature Information

Note
full consensus sequence for ribosome-binding sites upstream of start codons in E. coli; complementary to a region in the 3' end of the 16S rRNA (Chen et al., 1994)
Type
RBS
Category
rbs

Found in 356 Plasmids (showing 101–150)

Plasmid Species Position Strand
Prham-M.XbaI-M.EcoRI-M.SalI-p15A-aadA 170767 Synthetic 5283..5292 Fwd
Prham-M.XhoI-M.MunI-M.Ocy1ORF8430P-p15A-aadA 170768 Synthetic 468..477 Fwd
Prham-M.XhoI-M.MunI-M.Ocy1ORF8430P-p15A-aadA 170768 Synthetic 2211..2220 Fwd
Prham-M.XhoI-M.MunI-M.Ocy1ORF8430P-p15A-aadA 170768 Synthetic 2934..2943 Fwd
pCas12f1 171182 Synthetic 7986..7995 Fwd
pKAR2-Br512g3.1 171200 Synthetic 4267..4276 Fwd
pKAR2-Br512g3.2 171201 Synthetic 4267..4276 Fwd
pcryGFP-acta1-dmdGFP 172530 Danio rerio 12794..12803 Fwd
pspCas9-5Exo-tetra-com-hCLCN5-sp-g1 176237 Homo sapiens 5866..5875 Fwd
pspCas9-Exo-tetra-com-hCLCN5-sp-g1 176238 Homo sapiens 5866..5875 Fwd
pAT-WT-Myc 177717 Homo sapiens 1107..1116 Fwd
pATZ-Myc 177718 Homo sapiens 3727..3736 Fwd
pAT-WT-HA-GFP11 177719 Homo sapiens 1156..1165 Fwd
pATZ-HA-GFP11 177720 Homo sapiens 1495..1504 Fwd
pATZ-BFP-HA-GFP11 177721 Homo sapiens 1469..1478 Fwd
pGal-Trans-Myc-HA-GFP11-KDEL 177724 Homo sapiens 393..402 Fwd
pGal-Trans-Myc-eGFP-KDEL 177729 Homo sapiens 1523..1532 Fwd
pG108 - K 178039 Synthetic 4985..4994 Fwd
pBM19-sd4U 179692 Synthetic 3677..3686 Fwd
pS97splitRBP_S1-Enz 183767 Homo sapiens 5917..5926 Fwd
pS97splitRBP_S1dC2 183769 Homo sapiens 5917..5926 Fwd
pET24TEV-tSHIP1 183770 Homo sapiens 6705..6714 Fwd
pG108-K - AhpC-Glow 185135 Synthetic 5003..5012 Fwd
pcI-ts,ind+-(mtSSB delta20) 186280 Homo sapiens 1978..1987 Fwd
sCatch-GFP-6xHIS 186904 Synthetic 43..52 Fwd
sTag-BFP-6xHIS 186905 Synthetic 43..52 Fwd
pSLS.402 187202 Escherichia coli 3884..3893 Fwd
pBAD_dGFPmut3-AAV 187379 Synthetic 1320..1329 Fwd
pBAD_mCherry 187387 Synthetic 1359..1368 Fwd
pBAD_mCherry_GFP_++ 187389 Synthetic 1311..1320 Fwd
pBAD_mCherry_GFP_++ 187389 Synthetic 5504..5513 Fwd
pBAD_mCherry_GFP_-+ 187390 Synthetic 1083..1092 Fwd
pBAD_mCherry_GFP_-+ 187390 Synthetic 2857..2866 Fwd
pBAD_GFP_mCherry_++ 187391 Synthetic 1311..1320 Fwd
pBAD_GFP_mCherry_++ 187391 Synthetic 5410..5419 Fwd
pBAD_GFP_mCherry_-+ 187392 Synthetic 870..879 Fwd
pBAD_GFP_mCherry_-+ 187392 Synthetic 2644..2653 Fwd
R6K_BAD_GFP-mCherry_ChInt++ 187393 Synthetic 765..774 Fwd
R6K_BAD_GFP-mCherry_ChInt++ 187393 Synthetic 3494..3503 Fwd
R6K_BAD_GFP-mCherry_ChInt-- 187394 Synthetic 1645..1654 Fwd
R6K_BAD_GFP-mCherry_ChInt-- 187394 Synthetic 4374..4383 Fwd
R6K_BAD_mCherry-GFP_ChInt-- 187396 Synthetic 939..948 Fwd
R6K_BAD_mCherry-GFP_ChInt-- 187396 Synthetic 3575..3584 Fwd
pVoPo-GFP 187840 Synthetic 4124..4133 Fwd
pVoPo-mCh 187841 Synthetic 2780..2789 Fwd
pVoPo-mSc 187842 Synthetic 2768..2777 Fwd
pVoPo-mNG 187843 Synthetic 3283..3292 Fwd
pGB-GST-3C-mCherry-ATG14/Vps34/Vps15/BECN1 187936 Homo sapiens 6068..6077 Fwd
pGB-06-07-Vps34 187989 Homo sapiens 2770..2779 Fwd
pGBdest-GST-PI3Kc1 187992 Homo sapiens 5323..5332 Fwd

DNA Sequence Variants

Sequence context may differ across plasmids due to position and neighboring features.

DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
ACCTCCTTA
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT
DNA Sequence (9 bp)
TAAGGAGGT