boxB

protein_bind binding_site

Feature Information

Note
lambda N peptide binding site consisting of an RNA hairpin within the N-utliization (nut) site of the lambda bacteriophage transcript (Tan and Frankel, 1995)
Type
protein_bind
Category
binding_site

Found in 73 Plasmids (showing 51–73)

Plasmid Species Position Strand
pLY273 184155 Synthetic 1471..1490 Fwd
pLY273 184155 Synthetic 1493..1512 Fwd
pLY283 184156 Synthetic 1445..1464 Fwd
pLY283 184156 Synthetic 1471..1490 Fwd
pLY283 184156 Synthetic 1493..1512 Fwd
pCIwt-PRM-Wasabi 195553 Synthetic 2997..3012 Fwd
pTcI38-PRM-wasabi 195554 Synthetic 2997..3012 Fwd
pTcI39-PRM-wasabi 195555 Synthetic 2997..3012 Fwd
pTcI39-switch 195557 Synthetic 2921..2936 Fwd
pTcI39-switch 195557 Synthetic 4135..4150 Fwd
pBaseline-PRM-wasabi 195560 Synthetic 2997..3012 Fwd
pGTI25 20170 Arabidopsis thaliana 5..20 Fwd
pBR322-sgRNA-pvc18-20 243747 Synthetic 2921..2940 Fwd
pBR322-sgRNA-pvc18-20 243747 Synthetic 2976..2995 Fwd
pBR322-sgRNA-pvc18-20-Pdp1_NTD-Cre 243748 Synthetic 2921..2940 Fwd
pBR322-sgRNA-pvc18-20-Pdp1_NTD-Cre 243748 Synthetic 2976..2995 Fwd
pORTMAGE-2 72677 Escherichia coli 4067..4082 Fwd
pORTMAGE-3 72678 Escherichia coli 3908..3923 Fwd
pORTMAGE-4 72679 Escherichia coli 3908..3923 Fwd
pAL-pgi_NT 74067 Synthetic 82..97 Fwd
pAL-pyk_NT 74072 Synthetic 3181..3196 Fwd
pCali2 86119 Synthetic 5898..5913 Fwd
pThermeleon 86120 Synthetic 5384..5399 Fwd

DNA Sequence Variants

Sequence context may differ across plasmids due to position and neighboring features.

DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (15 bp)
GCCCTGAAGAAGGGC
DNA Sequence (15 bp)
GCCCTGAAGAAGGGC
DNA Sequence (15 bp)
GCCCTGAAGAAGGGC
DNA Sequence (15 bp)
GCCCTTCTTCAGGGC
DNA Sequence (15 bp)
GCCCTGAAGAAGGGC
DNA Sequence (15 bp)
GCCCTGAAGAAGGGC
DNA Sequence (15 bp)
GCCCTGAAGAAGGGC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (15 bp)
GCCCTGAAGAAGGGC
DNA Sequence (15 bp)
GCCCTTCTTCAGGGC
DNA Sequence (15 bp)
GCCCTTCTTCAGGGC
DNA Sequence (15 bp)
GCCCTGAAGAAGGGC
DNA Sequence (15 bp)
GCCCTGAAGAAGGGC
DNA Sequence (15 bp)
GCCCTGAAGAAGGGC
DNA Sequence (15 bp)
GCCCTGAAGAAGGGC