boxB

protein_bind binding_site

Feature Information

Note
lambda N peptide binding site consisting of an RNA hairpin within the N-utliization (nut) site of the lambda bacteriophage transcript (Tan and Frankel, 1995)
Type
protein_bind
Category
binding_site

Found in 73 Plasmids (showing 1–50)

Plasmid Species Position Strand
pLY103 130937 Synthetic 19..38 Fwd
pLY103 130937 Synthetic 2971..2990 Fwd
pLY108 130938 Synthetic 3..22 Fwd
pLY108 130938 Synthetic 58..77 Fwd
pLY105 130939 Synthetic 182..201 Fwd
pLY105 130939 Synthetic 237..256 Fwd
pLY110 130940 Synthetic 47..66 Fwd
pLY110 130940 Synthetic 0..3004 Fwd
pLY106 130941 Synthetic 2940..2959 Fwd
pLY106 130941 Synthetic 0..3007 Fwd
pLY111 130942 Synthetic 2571..2590 Fwd
pLY111 130942 Synthetic 2626..2645 Fwd
pLY107 130943 Synthetic 388..407 Fwd
pLY107 130943 Synthetic 443..462 Fwd
pLY112 130944 Synthetic 2392..2411 Fwd
pLY112 130944 Synthetic 2447..2466 Fwd
pLY74 130945 Synthetic 115..134 Fwd
pLY74 130945 Synthetic 170..189 Fwd
pLY86 130949 Synthetic 34..53 Fwd
pLY86 130949 Synthetic 2985..3004 Fwd
pLY130 130952 Synthetic 231..250 Fwd
pLY130 130952 Synthetic 286..305 Fwd
pLY131 130956 Synthetic 1742..1761 Fwd
pLY131 130956 Synthetic 1797..1816 Fwd
pLY132 130960 Synthetic 267..286 Fwd
pLY132 130960 Synthetic 322..341 Fwd
pLY133 130961 Synthetic 844..863 Fwd
pLY133 130961 Synthetic 899..918 Fwd
pLY134 130962 Synthetic 234..253 Fwd
pLY134 130962 Synthetic 289..308 Fwd
pLY76 130963 Synthetic 2811..2830 Fwd
pLY76 130963 Synthetic 2866..2885 Fwd
pLY77 130964 Synthetic 47..66 Fwd
pLY77 130964 Synthetic 0..3006 Fwd
pANY4 164897 Synthetic 973..988 Fwd
pANY4-pL18-ccdB 164898 Synthetic 973..988 Fwd
pANY4-pR18/pL18-ccdB 164899 Synthetic 973..988 Fwd
pLY232 184149 Synthetic 1433..1452 Fwd
pLY232 184149 Synthetic 1459..1478 Fwd
pLY232 184149 Synthetic 1481..1500 Fwd
pLY237 184150 Synthetic 1443..1462 Fwd
pLY237 184150 Synthetic 1469..1488 Fwd
pLY237 184150 Synthetic 1491..1510 Fwd
pLY239 184152 Synthetic 1444..1463 Fwd
pLY239 184152 Synthetic 1470..1489 Fwd
pLY239 184152 Synthetic 1492..1511 Fwd
pLY251 184153 Synthetic 50..69 Fwd
pLY251 184153 Synthetic 76..95 Fwd
pLY251 184153 Synthetic 98..117 Fwd
pLY273 184155 Synthetic 1445..1464 Fwd

DNA Sequence Variants

Sequence context may differ across plasmids due to position and neighboring features.

DNA Sequence (19 bp)
GGGCCCTTCTTCAGGGCCC
DNA Sequence (19 bp)
GGGCCCTTCTTCAGGGCCC
DNA Sequence (19 bp)
GGGCCCTTCTTCAGGGCCC
DNA Sequence (19 bp)
GGGCCCTTCTTCAGGGCCC
DNA Sequence (19 bp)
GGGCCCTTCTTCAGGGCCC
DNA Sequence (19 bp)
GGGCCCTTCTTCAGGGCCC
DNA Sequence (19 bp)
GGGCCCTTCTTCAGGGCCC
DNA Sequence (19 bp)
GGGCCCTTCTTCAGGGCCC
DNA Sequence (19 bp)
GGGCCCTTCTTCAGGGCCC
DNA Sequence (19 bp)
GGGCCCTTCTTCAGGGCCC
DNA Sequence (19 bp)
GGGCCCTTCTTCAGGGCCC
DNA Sequence (19 bp)
GGGCCCTTCTTCAGGGCCC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (19 bp)
GGGCCCTTCTTCAGGGCCC
DNA Sequence (19 bp)
GGGCCCTTCTTCAGGGCCC
DNA Sequence (19 bp)
GGGCCCTTCTTCAGGGCCC
DNA Sequence (19 bp)
GGGCCCTTCTTCAGGGCCC
DNA Sequence (19 bp)
GGGCCCTTCTTCAGGGCCC
DNA Sequence (19 bp)
GGGCCCTTCTTCAGGGCCC
DNA Sequence (19 bp)
GGGCCCTTCTTCAGGGCCC
DNA Sequence (19 bp)
GGGCCCTTCTTCAGGGCCC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (19 bp)
GGGCCCTTCTTCAGGGCCC
DNA Sequence (19 bp)
GGGCCCTTCTTCAGGGCCC
DNA Sequence (19 bp)
GGGCCCTTCTTCAGGGCCC
DNA Sequence (19 bp)
GGGCCCTTCTTCAGGGCCC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (19 bp)
GGGCCCTTCTTCAGGGCCC
DNA Sequence (19 bp)
GGGCCCTTCTTCAGGGCCC
DNA Sequence (15 bp)
GCCCTTCTTCAGGGC
DNA Sequence (15 bp)
GCCCTTCTTCAGGGC
DNA Sequence (15 bp)
GCCCTTCTTCAGGGC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC
DNA Sequence (19 bp)
GGGCCCTGAAGAAGGGCCC