TEE

CDS coding

Feature Information

Gene
cspA
Product
translation enhancing element for E. coli (Qing et al., 2004)
Type
CDS
Category
coding

Protein Sequence

5 amino acids
MNHKV

Found in 42 Plasmids

Plasmid Species Position Strand
pRibo-Tt 154124 Synthetic 4707..4722 Rev
poRBS 154125 Synthetic 5668..5683 Rev
pRBS wt 154126 Synthetic 5258..5273 Rev
pAM552 154131 Synthetic 3905..3920 Rev
pDH42(CUG/A) 154132 Synthetic 2275..2290 Rev
GST-FBL 179245 Homo sapiens 2763..2775 Rev
pCold I-Hero7 187926 Homo sapiens 257..272 Fwd
pCold I-Hero9 187927 Homo sapiens 257..272 Fwd
pCold I-Hero11 187928 Homo sapiens 257..272 Fwd
pCold I-Hero13 187929 Homo sapiens 257..272 Fwd
pCold I-Hero20 187930 Homo sapiens 257..272 Fwd
pCold I-Hero45 187931 Homo sapiens 257..272 Fwd
pHIT203 204512 Caenorhabditis elegans 3126..3138 Fwd
pColdI-GST-mGTSF1 214671 Mus musculus 2219..2234 Fwd
pColdI-GST-mGTSF1l 214817 Mus musculus 2219..2234 Fwd
pColdI-DDX3_helicase_core 233618 Homo sapiens 255..270 Fwd
pColdI-DDX3_helicase_core_Q360L 233619 Homo sapiens 255..270 Fwd
pColdI-DDX3_helicase_core_Q360P 233620 Homo sapiens 255..270 Fwd
FBL 25495 Homo sapiens 611..623 Rev
pCold TDP43 WT 27451 Homo sapiens 255..270 Fwd
pcold-6xHis-HRV3Csite-DmLoqsPA 41093 Drosophila melanogaster 2..17 Fwd
pcold-6xHis-HRV3Csite-DmLoqsPB 41094 Drosophila melanogaster 2..17 Fwd
pcold-6xHis-HRV3Csite-DmLoqsPD 41095 Drosophila melanogaster 2..17 Fwd
pcold-6xHis-HRV3Csite-HsTRBP 41096 Homo sapiens 2..17 Fwd
pcold-6xHis-HRV3Csite-HsPACT 41097 Homo sapiens 2..17 Fwd
pColdII-SIRPT1-Bubalus bubalis 75350 Synthetic 9..24 Fwd
pColdII-SIRPT1-Loxodonta Africana 75351 Synthetic 7..22 Fwd
pColdII-SIRPT1-Serinus canaria 75353 Synthetic 9..24 Fwd
pColdII-SIRPT1-Pelodiscus sinensis 75354 Synthetic 9..24 Fwd
pColdII-SIRPT1-Latimeria chalumnae 75356 Synthetic 14..29 Fwd
pColdII-SIRPT1-Cucumis sativus 75357 Synthetic 13..28 Fwd
pColdII-SIRPT1-Nelumbo nucifera 75358 Synthetic 9..24 Fwd
pColdII-SIRPT1-Jatropha curcas 75359 Synthetic 13..28 Fwd
pColdII-SIRPT1-Ceratotherium-simum-simum 78111 Synthetic 7..22 Fwd
pColdII-SIRPT1-Chlorocebus sabaeus Sacsin 78112 Synthetic 0..15 Fwd
pColdII-SIRPT1-Eptesicus fuscus 78113 Synthetic 3..18 Fwd
pColdII-SIRPT1-Equus caballus 78114 Synthetic 6..21 Fwd
pColdII-SIRPT1-Leptonychotes weddellii 78115 Synthetic 0..12 Fwd
pColdII-SIRPT1-Mustela putorius furo 78116 Synthetic 4..19 Fwd
pColdII-SIRPT1-Phoenix dactylifera 78117 Synthetic 2..17 Fwd
pQhsCDtRNA+ 86014 Homo sapiens 8815..8827 Rev
pQhsCDtRNA- 86015 Homo sapiens 9206..9218 Rev

DNA Sequence Variants

Sequence context may differ across plasmids due to position and neighboring features.

DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (12 bp)
AATCACAAAGTG
Protein Sequence (4 aa)
NHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (12 bp)
AATCACAAAGTG
Protein Sequence (4 aa)
NHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (12 bp)
AATCACAAAGTG
Protein Sequence (4 aa)
NHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (12 bp)
AATCACAAAGTG
Protein Sequence (4 aa)
NHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (15 bp)
ATGAATCACAAAGTG
Protein Sequence (5 aa)
MNHKV
DNA Sequence (12 bp)
AATCACAAAGTG
Protein Sequence (4 aa)
NHKV
DNA Sequence (12 bp)
AATCACAAAGTG
Protein Sequence (4 aa)
NHKV