ZF binding site

protein_bind binding_site

Feature Information

Note
target sequence for the CCR5TC zinc-finger domain from the CCR5-224 (+) zinc-finger nuclease (Perez et al., 2008; Gross et al., 2013)
Type
protein_bind
Category
binding_site

Found in 26 Plasmids

Plasmid Species Position Strand
pRS316-VTC4 108691 Saccharomyces cerevisiae 1960..1972 Fwd
CvcE in pGEX4t 112977 Drosophila melanogaster 3367..3379 Fwd
6DXH (USP05) 119968 Homo sapiens 367..379 Fwd
tUI-HA 122662 Homo sapiens 654..666 Fwd
tIVR 122663 Homo sapiens 571..583 Fwd
tISR 122664 Homo sapiens 598..610 Fwd
pRSET Nucleolin 13037 Homo sapiens 1152..1164 Fwd
pRSET Nucleolin 13037 Homo sapiens 1170..1182 Fwd
pGEX-6P-1-HsTNRC6A_1209-1709-M2WA-CIM1-2mut-… 147512 Homo sapiens 1540..1552 Fwd
pGEX-6P-1-HsTNRC6A_1209-1709_S 147520 Homo sapiens 1540..1552 Fwd
pGEX-6P-1-HsTNRC6A_1209-1709-CIM1-2mut_S 147521 Homo sapiens 1543..1555 Fwd
pGEX-6P-1-HsTNRC6A_1209-1709-CIM1-2mut-F1359… 147522 Homo sapiens 1543..1555 Fwd
pGEX-6P-1-HsTNRC6A_1209-1709-CIM1mut_S 147523 Homo sapiens 1543..1555 Fwd
pGEX-6P-1-HsTNRC6A_1209-1709-CIM2mut_S 147524 Homo sapiens 1540..1552 Fwd
pGEX-6P-1-HsTNRC6A_1209-1709-F1359A_S 147525 Homo sapiens 1540..1552 Fwd
pGEX-6P-1-HsTNRC6A_1209-1709-M2WA_S 147526 Homo sapiens 1540..1552 Fwd
pGEX-6P-1-HsTNRC6A_1209-1709-M2WA-CIM1-2mut_S 147527 Homo sapiens 1540..1552 Fwd
pGEX-6P-1-HsTNRC6A_1209-1709-M2WA-F1359A_S 147528 Homo sapiens 1540..1552 Fwd
pHIT517 204518 Caenorhabditis elegans 1980..1992 Fwd
USP5 25299 Homo sapiens 883..895 Fwd
pGEX-MK1 29638 Mus musculus 558..570 Fwd
pGEX-MK4(6) 30189 Mus musculus 676..688 Fwd
UAS::PTPRDb-DN-GFP 37112 Danio rerio 267..279 Fwd
tol2-mpx-cxcr4b whim-gfp 41089 Danio rerio 7134..7146 Fwd
pFA1 46789 Saccharomyces cerevisiae 94..106 Fwd
pFA3 46790 Saccharomyces cerevisiae 90..102 Fwd

DNA Sequence Variants

Sequence context may differ across plasmids due to position and neighboring features.

DNA Sequence (12 bp)
GATGAGGATGAC
DNA Sequence (12 bp)
GATGAGGATGAC
DNA Sequence (12 bp)
GATGAGGATGAC
DNA Sequence (12 bp)
GATGAGGATGAC
DNA Sequence (12 bp)
GATGAGGATGAC
DNA Sequence (12 bp)
GATGAGGATGAC
DNA Sequence (12 bp)
GATGAGGATGAC
DNA Sequence (12 bp)
GATGAGGATGAC
DNA Sequence (12 bp)
GTCATCCTCATC
DNA Sequence (12 bp)
GTCATCCTCATC
DNA Sequence (12 bp)
GTCATCCTCATC
DNA Sequence (12 bp)
GTCATCCTCATC
DNA Sequence (12 bp)
GTCATCCTCATC
DNA Sequence (12 bp)
GTCATCCTCATC
DNA Sequence (12 bp)
GTCATCCTCATC
DNA Sequence (12 bp)
GTCATCCTCATC
DNA Sequence (12 bp)
GTCATCCTCATC
DNA Sequence (12 bp)
GTCATCCTCATC
DNA Sequence (12 bp)
GATGAGGATGAC
DNA Sequence (12 bp)
GATGAGGATGAC
DNA Sequence (12 bp)
GTCATCCTCATC
DNA Sequence (12 bp)
GTCATCCTCATC
DNA Sequence (12 bp)
GATGAGGATGAC
DNA Sequence (12 bp)
GTCATCCTCATC
DNA Sequence (12 bp)
GATGAGGATGAC
DNA Sequence (12 bp)
GATGAGGATGAC