PAmKate — PlasmidDB

Feature Information

Product

monomeric photoactivatable red fluorescent protein (Gunewardene et al., 2011)

Note

mammalian codon-optimized

Type

CDS

Protein Sequence

236 amino acids

MVSKGEELIKENMHMKLYMEGTVNNHHFKCTSEGEGKPYEGTQTMRIKAVEGGPLPFAFDILATSFMYGSKTFINHTQGIPDFFKQSFPEGFTWERVTTYEDGGVLTATQDTSLQDGCLIYNVKIRGVNFPSNGPVMQKKTLGWEASTETLYPADGGLEGRADMALKLVGGGHLICNLKTTYRSKKPAKNLKMPGVYYVDRRLERIKEADKETYVEQHEVAVARYCDLPSKLGHKL

Found in 5 Plasmids

Plasmid	Species	Position	Strand
pCS2+cPLA2-mKate2 162068	Danio rerio	3334..4045	Fwd
LR (hsp70I: cPLA2-mK2) 162564	Danio rerio	9797..10508	Fwd
pSB-CMV-MCS-Puro dr_cPLA2-mKate2 163844	Danio rerio	3033..3744	Fwd
pCS2-hcar1-4-mKate2 226712	Danio rerio	1054..1765	Fwd
pDestTol2CG2-QUAS:cPla2-mKate2 241913	Danio rerio	8609..9320	Fwd

DNA Sequence Variants

Sequence context may differ across plasmids due to position and neighboring features.

pCS2+cPLA2-mKate2 162068

3334..4045 (Fwd)

DNA Sequence (711 bp)

ATGGTGTCTAAGGGCGAAGAGCTGATTAAGGAGAACATGCACATGAAGCTGTACATGGAGGGCACCGTGAACAACCACCACTTCAAGTGCACATCCGAGGGCGAAGGCAAGCCCTACGAGGGCACCCAGACCATGAGAATCAAGGCCGTCGAGGGCGGCCCTCTCCCCTTCGCCTTCGACATCCTGGCTACCAGCTTCATGTACGGCAGCAAAACCTTCATCAACCACACCCAGGGCATCCCCGACTTCTTTAAGCAGTCCTTCCCTGAGGGCTTCACATGGGAGAGAGTCACCACATACGAAGACGGGGGCGTGCTGACCGCTACCCAGGACACCAGCCTCCAGGACGGCTGCCTCATCTACAACGTCAAGATCAGAGGGGTGAACTTCCCATCCAACGGCCCTGTGATGCAGAAGAAAACACTCGGCTGGGAGGCCTCCACCGAGACCCTGTACCCCGCTGACGGCGGCCTGGAAGGCAGAGCCGACATGGCCCTGAAGCTCGTGGGCGGGGGCCACCTGATCTGCAACTTGAAGACCACATACAGATCCAAGAAACCCGCTAAGAACCTCAAGATGCCCGGCGTCTACTATGTGGACAGAAGACTGGAAAGAATCAAGGAGGCCGACAAAGAGACCTACGTCGAGCAGCACGAGGTGGCTGTGGCCAGATACTGCGACCTCCCTAGCAAACTGGGGCACAAACTGTAA

Protein Sequence (236 aa)

LR (hsp70I: cPLA2-mK2) 162564

9797..10508 (Fwd)

DNA Sequence (711 bp)

Protein Sequence (236 aa)

pSB-CMV-MCS-Puro dr_cPLA2-mKate2 163844

3033..3744 (Fwd)

DNA Sequence (711 bp)

Protein Sequence (236 aa)

pCS2-hcar1-4-mKate2 226712

1054..1765 (Fwd)

DNA Sequence (711 bp)

ATGGTGTCTAAGGGCGAAGAGCTGATTAAGGAGAACATGCACATGAAGCTGTACATGGAGGGCACCGTGAACAACCACCACTTCAAGTGCACATCCGAGGGCGAAGGCAAGCCCTACGAGGGCACCCAGACCATGAGAATCAAGGCCGTCGAGGGCGGCCCTCTCCCCTTCGCCTTCGACATCCTGGCTACCAGCTTCATGTACGGCAGCAAAACCTTCATCAACCACACCCAGGGCATCCCCGACTTCTTTAAGCAGTCCTTCCCTGAGGGCTTTACATGGGAGAGAGTCACCACATACGAAGACGGGGGCGTGCTGACCGCTACCCAGGACACCAGCCTCCAGGACGGCTGCCTCATCTACAACGTCAAGATCAGAGGGGTGAACTTCCCATCCAACGGCCCTGTGATGCAGAAGAAAACACTCGGCTGGGAGGCCTCCACCGAGACCCTGTACCCCGCTGACGGCGGCCTGGAAGGCAGAGCCGACATGGCCCTGAAGCTCGTGGGCGGGGGCCACCTGATCTGCAACTTGAAGACCACATACAGATCCAAGAAACCCGCTAAGAACCTCAAGATGCCCGGCGTCTACTATGTGGACAGAAGACTGGAAAGAATCAAGGAGGCCGACAAAGAGACCTACGTCGAGCAGCACGAGGTGGCTGTGGCCAGATACTGCGACCTCCCTAGCAAACTGGGGCACAAACTGTAA

Protein Sequence (236 aa)

pDestTol2CG2-QUAS:cPla2-mKate2 241913

8609..9320 (Fwd)

DNA Sequence (711 bp)

Protein Sequence (236 aa)