loxP

protein_bind binding_site

Feature Information

Note

Cre-mediated recombination occurs in the 8-bp core sequence (ATGTATGC) (Shaw et al., 2021).

Type

protein_bind

Category

binding_site

Found in 735 Plasmids (showing 301–350)

Plasmid	Species	Position	Strand
pJCKan 185862	Synthetic	57..91	Fwd
pJCKan 185862	Synthetic	1564..1598	Fwd
GST-3C-FIP200-GFP 187832	Homo sapiens	1131..1165	Rev
pGB-05-06-GST-ATG14 187987	Homo sapiens	1132..1166	Rev
pGB-06-07-Vps34 187989	Homo sapiens	1116..1150	Rev
pGB-05-08-Vps15 187990	Homo sapiens	1137..1171	Rev
pGB-08-09-BECN1 187991	Homo sapiens	1118..1152	Rev
GBH-R-gcryBFP.1 187995	Danio rerio	734..768	Rev
GBH-R-gcryBFP.1 187995	Danio rerio	4958..4992	Rev
GBH-R-gcryBFP.2 187996	Danio rerio	734..768	Rev
GBH-R-gcryBFP.2 187996	Danio rerio	4957..4991	Rev
GBH-R-gcryGFP.1 187998	Danio rerio	734..768	Rev
GBH-R-gcryGFP.1 187998	Danio rerio	4971..5005	Rev
GBH-R-gcryGFP.2 187999	Danio rerio	734..768	Rev
GBH-R-gcryGFP.2 187999	Danio rerio	4970..5004	Rev
GBH-R-gcryGFP.3 188000	Danio rerio	734..768	Rev
GBH-R-gcryGFP.3 188000	Danio rerio	4969..5003	Rev
GBH-R-cmlc2BFP.1 188001	Danio rerio	988..1022	Rev
GBH-R-cmlc2BFP.1 188001	Danio rerio	5101..5135	Rev
GBH-R-cmlc2BFP.2 188002	Danio rerio	988..1022	Rev
GBH-R-cmlc2BFP.2 188002	Danio rerio	5100..5134	Rev
GBH-R-cmlc2BFP.3 188003	Danio rerio	988..1022	Rev
GBH-R-cmlc2BFP.3 188003	Danio rerio	5099..5133	Rev
GBH-R-cmlc2GFP.1 188004	Danio rerio	988..1022	Rev
GBH-R-cmlc2GFP.1 188004	Danio rerio	5080..5114	Rev
GBH-R-cmlc2GFP.3 188006	Danio rerio	988..1022	Rev
GBH-R-cmlc2GFP.3 188006	Danio rerio	5078..5112	Rev
GBH-R-insBFP.1 188007	Danio rerio	988..1022	Rev
GBH-R-insBFP.1 188007	Danio rerio	5204..5238	Rev
GBH-R-insBFP.2 188008	Danio rerio	988..1022	Rev
GBH-R-insBFP.2 188008	Danio rerio	5200..5234	Rev
GBH-R-insBFP.3 188009	Danio rerio	988..1022	Rev
GBH-R-insBFP.3 188009	Danio rerio	5202..5236	Rev
GBH-R-insGFP.1 188010	Danio rerio	988..1022	Rev
GBH-R-insGFP.1 188010	Danio rerio	5183..5217	Rev
GBH-R-insGFP.2 188011	Danio rerio	988..1022	Rev
GBH-R-insGFP.2 188011	Danio rerio	5182..5216	Rev
GBH-R-insGFP.3 188012	Danio rerio	988..1022	Rev
GBH-R-insGFP.3 188012	Danio rerio	5181..5215	Rev
GBH-2aG4-gcryBFP.1 188013	Danio rerio	734..768	Rev
GBH-2aG4-gcryBFP.1 188013	Danio rerio	4995..5029	Rev
GBH-2aG4-gcryBFP.2 188014	Danio rerio	734..768	Rev
GBH-2aG4-gcryBFP.2 188014	Danio rerio	4994..5028	Rev
GBH-2aG4-gcryBFP.3 188015	Danio rerio	734..768	Rev
GBH-2aG4-gcryBFP.3 188015	Danio rerio	4993..5027	Rev
GBH-2aG4-gcryGFP.1 188016	Danio rerio	734..768	Rev
GBH-2aG4-gcryGFP.1 188016	Danio rerio	5008..5042	Rev
GBH-2aG4-gcryGFP.2 188017	Danio rerio	734..768	Rev
GBH-2aG4-gcryGFP.2 188017	Danio rerio	5007..5041	Rev
GBH-2aG4-gcryGFP.3 188018	Danio rerio	734..768	Rev

1
…
4
5
6
7
8
9
10
…
15

DNA Sequence Variants

Sequence context may differ across plasmids due to position and neighboring features.

pJCKan 185862

57..91 (Fwd)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

pJCKan 185862

1564..1598 (Fwd)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GST-3C-FIP200-GFP 187832

1131..1165 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

pGB-05-06-GST-ATG14 187987

1132..1166 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

pGB-06-07-Vps34 187989

1116..1150 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

pGB-05-08-Vps15 187990

1137..1171 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

pGB-08-09-BECN1 187991

1118..1152 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-gcryBFP.1 187995

734..768 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-gcryBFP.1 187995

4958..4992 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-gcryBFP.2 187996

734..768 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-gcryBFP.2 187996

4957..4991 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-gcryGFP.1 187998

734..768 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-gcryGFP.1 187998

4971..5005 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-gcryGFP.2 187999

734..768 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-gcryGFP.2 187999

4970..5004 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-gcryGFP.3 188000

734..768 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-gcryGFP.3 188000

4969..5003 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-cmlc2BFP.1 188001

988..1022 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-cmlc2BFP.1 188001

5101..5135 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-cmlc2BFP.2 188002

988..1022 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-cmlc2BFP.2 188002

5100..5134 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-cmlc2BFP.3 188003

988..1022 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-cmlc2BFP.3 188003

5099..5133 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-cmlc2GFP.1 188004

988..1022 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-cmlc2GFP.1 188004

5080..5114 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-cmlc2GFP.3 188006

988..1022 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-cmlc2GFP.3 188006

5078..5112 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-insBFP.1 188007

988..1022 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-insBFP.1 188007

5204..5238 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-insBFP.2 188008

988..1022 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-insBFP.2 188008

5200..5234 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-insBFP.3 188009

988..1022 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-insBFP.3 188009

5202..5236 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-insGFP.1 188010

988..1022 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-insGFP.1 188010

5183..5217 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-insGFP.2 188011

988..1022 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-insGFP.2 188011

5182..5216 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-insGFP.3 188012

988..1022 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-R-insGFP.3 188012

5181..5215 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-2aG4-gcryBFP.1 188013

734..768 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-2aG4-gcryBFP.1 188013

4995..5029 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-2aG4-gcryBFP.2 188014

734..768 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-2aG4-gcryBFP.2 188014

4994..5028 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-2aG4-gcryBFP.3 188015

734..768 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-2aG4-gcryBFP.3 188015

4993..5027 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-2aG4-gcryGFP.1 188016

734..768 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-2aG4-gcryGFP.1 188016

5008..5042 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-2aG4-gcryGFP.2 188017

734..768 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-2aG4-gcryGFP.2 188017

5007..5041 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT

GBH-2aG4-gcryGFP.3 188018

734..768 (Rev)

DNA Sequence (34 bp)

ATAACTTCGTATAATGTATGCTATACGAAGTTAT