lox5171

protein_bind binding_site

Feature Information

Note
Cre-mediated recombination occurs in the 8-bp core sequence (ATGTGTAC) (Shaw et al., 2021). lox5171 sites are compatible with each other, but incompatible with loxP or loxN sites (Lee and Saito, 1988).
Type
protein_bind
Category
binding_site

Found in 8 Plasmids

Plasmid Species Position Strand
KI-eab2-AA 182157 Danio rerio 6472..6506 Rev
KI-eab2-GG 182158 Danio rerio 416..450 Fwd
KI-eab2-AG 182159 Danio rerio 407..441 Fwd
KI-eab2-GA 182160 Danio rerio 6741..6775 Rev
pIS002 194013 Mus musculus 1173..1207 Rev
pIS002 194013 Mus musculus 3091..3125 Rev
pIS003 194014 Mus musculus 1970..2004 Rev
pIS003 194014 Mus musculus 3775..3809 Rev

DNA Sequence Variants

Sequence context may differ across plasmids due to position and neighboring features.

DNA Sequence (34 bp)
ATAACTTCGTATAATGTGTACTATACGAAGTTAT
DNA Sequence (34 bp)
ATAACTTCGTATAATGTGTACTATACGAAGTTAT
DNA Sequence (34 bp)
ATAACTTCGTATAATGTGTACTATACGAAGTTAT
DNA Sequence (34 bp)
ATAACTTCGTATAATGTGTACTATACGAAGTTAT
DNA Sequence (34 bp)
ATAACTTCGTATAATGTGTACTATACGAAGTTAT
DNA Sequence (34 bp)
ATAACTTCGTATAATGTGTACTATACGAAGTTAT
DNA Sequence (34 bp)
ATAACTTCGTATAATGTGTACTATACGAAGTTAT
DNA Sequence (34 bp)
ATAACTTCGTATAATGTGTACTATACGAAGTTAT